Services and Pricing
Next Generation Sequencing (NGS)
- Whole Genome Sequencing
- Whole Exome Sequencing
- Cell Free DNA Sequencing
- RNASeq, Capture method
- Total RNASeq
- TCRRNASeq
- miRNA-seq
- Targeted Sequencing (Cancer Genomics Panel, Solid Tumor Panel & Liquid Tumor Panel)
Single-cell Analysis
- 3' Single Cell RNASeq, Gene Expression
- Single Cell RNASeq, Fixed Cells
- 5' Single Cell Immune Profiling
- Single Cell Human BCR
- Single Cell Human TCR
- Single Cell Multiome
- Single Cell ATAC V2
Spatial Transcriptomics
- Visium CytAssist mini (6.5 mm)
- Visium CytAssist max (11mm)
Prices
These tables include Cancer Genomics Laboratory (CGL) platforms and corresponding FY25 prices, effective September 1, 2024.
Targeted NGS
Service | Average Coverage | Cost/sample |
---|---|---|
Agilent_CGP_DNA_V1 |
1000x |
$735 |
Agilent_CGP_RNA_V1 |
10,000 reads |
$670 |
Takara TCRSeq a/b |
|
$635 |
Whole Exome Sequencing (WES)
Service |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|
Agilent WES |
200x |
$885 |
This new Exon V8 provides comprehensive and most up-to-date coverage of protein coding regions from the most updated databases. It also covers the TERT promoter and hard-to-capture exons that are omitted by other exomes on the market. |
100x |
$745 |
RNASeq
Service |
Sample type |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|---|
RNASeq_Cap |
Tumor RNA |
70M reads |
$850 |
Recommended for all new projects. Capture-based Agilent RNASeq v8. |
Illumina Total_RNASeq |
Tumor RNA |
50M Reads |
$800 |
Whole-transcriptome analysis with total RNA sequencing (RNA-Seq) detects coding plus multiple forms of noncoding RNA. Total RNA-Seq can accurately measure gene and transcript abundance, and identify known and novel features of the transcriptome. |
Takara RNASeq_Ultra_Low |
Tumor RNA |
30M reads |
$745 |
Whole-transcriptome analysis for ultra-low amounts of total RNA or directly from multiple intact cells (<1,000 cells). This platform can accommodate an input of 10 pg of total RNA. |
Takara miRNA |
Tumor miRNA |
2.2M Reads |
$785 |
For small RNASeq including micro RNA |
Whole Genome Sequencing (WGS)
Service |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|
WGS |
Up to 10x |
$750 |
Agilent WGS |
Up to 30x |
$1,365 |
||
Up to 60x |
$2,180 |
Single Cell Analysis
Service |
Sample type |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|---|
3' Single Cell RNASeq, Gene Expression |
Whole cells or Nuclei |
5,000 cells, 25,000 reads/cell |
$3675 |
The 3' Single Cell Assay from 10x Genomics is a powerful tool for transcriptomic analysis of individual cells. This assay provides a comprehensive view of gene expression in tens of thousands of individual cells, allowing researchers to identify rare cell types, discover new cell types, and analyze gene expression dynamics during development, disease progression, and drug response. |
Single Cell RNASeq, Fixed Cells |
Fixed Cells or Nuclei |
5,000 cells, 25,000 reads/cell |
$3755 |
The Fixed RNA Single Cell Assay from 10x Genomics enables an analysis of probe-targeted whole transcriptome at single cell/nuclei level from formalin-fixed, paraffin-embedded (FFPE) tissues. This assay allows researchers to analyze gene expression in archived tissue samples, which may have been previously inaccessible due to degradation of RNA. |
5' Single Cell Immune Profiling |
Sorted cells |
5,000 cells, 25,000 reads/cell |
$3700 |
The 5' V2 Immune Profiling Single Cell Assay from 10x Genomics is a specialized assay designed for the analysis of full-length V(D)J sequences at a single-cell level. This assay allows for the identification of immune cell types and the analysis of their gene expression patterns, including identifying T and/or B cell receptors and characterizing the immune response to disease. |
Single Cell Human BCR |
|
Add-ons; please contact CGL |
||
Single Cell Human TCR |
||||
Single Cell Multiome Gene Expression + ATAC |
Nuclei Only |
5,000 cells, 25,000 reads/cell |
$5,775 |
Multiomic Gene Expression + ATAC Single Cell Assay enables simultaneous profiling of both 3' gene expression and chromatin accessibility at a single-cell level. The gene expression component of the assay uses barcoding technology to capture RNA transcripts from individual cells, while the ATAC (Assay for Transposase-Accessible Chromatin) component measures the accessibility of chromatin in the same cells. |
Single Cell ATAC V2 |
Nuclei Only |
5,000 cells, 25,000 reads/cell |
$3,450 |
This platform can be used to analyze the epigenetic state of individual cells by measuring the accessibility of chromatin regions in the genome. The assay is based on the use of a transposase enzyme that cleaves open regions of chromatin, allowing the insertion of sequencing adapters. The sequencing adapters serve as primers for PCR amplification of the genomic DNA, which is then sequenced to identify the accessible chromatin regions. |
Spatial Transcriptomics
Service |
Sample type |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|---|
Visium CytAssist Mini (6.5 mm) |
Tissue Slides or Tissue MicroArray |
5,000 cells, 25,000 reads/cell |
$2,650 |
This solution allows researchers to map gene expression in tissue samples, enabling them to study the spatial organization of cells within tissues and to identify cell types and subtypes. The solution includes a microfluidic chip, reagents and software for data analysis. |
Visium CytAssist Max (11 mm) |
5,000 cells, 25,000 reads/cell |
$5,300 |
||
Visium HD |
$4,835 |
Upon request or for project continuation
Service |
Sample type |
Average Coverage |
Cost/sample |
Brief description |
---|---|---|---|---|
Solid Tumor Panel (STP) |
Tumor |
up to 500x |
$555 |
322 genes sequenced (all exons) and global copy number |
Normal |
up to 100x |
$470 |
||
Liquid Tumor Panel (LTP) |
Tumor |
up to 500x |
$555 |
303 genes sequenced (all exons) and global copy number |
Normal |
up to 100x |
$470 |
Payment
Inside MD Anderson
PeopleSoft Account/Chart field
Outside MD Anderson
Non-MD Anderson investigator-led projects may incur an additional 60% overhead charge. Any investigators who are participating in the CCSG Texas Medical Center MOU are exempt from this 60% overhead charge. Our preferred method of payment is by credit card.
You can complete the credit card authorization form and email it to CGL@mdanderson.org. We can also accept a purchase order (PO) or wire transfer if paying by credit card is not possible.